教學乃是以以投影片講義之方式，摘錄出生物資訊學中常見之原理與常用之應用開發工具，以利學生在短時間內得以入門並能順利上手為原則。除此之外，並配合精準醫學與大數據資料庫等相關技術，以及對深度學習的淺介。
This teaching course is based on the use of slides as a handout to excerpt the common principles and
commonly used application development tools in bioinformatics so that students can get started in a
short period of time and can successfully use the principle. In addition, related technologies such as
precision medicine and big data database, as well as brief introduction to deep learning technology.
先修科目Prerequisites
教學方式Teaching Methods
評量方式Assessment
平時成績(30%) 期中成績(30%) 期末成績(40%)
參考書目Reference
Andreas D. et al., (2005). Bioinformatics . Wiley. (ISBN:0-471-47878-4)
教學進度Course Schedule
2023/09/13 Python 安裝與功能簡介
What is bioinformatics?
陳柏源(Chen, Po-Yuan) 2023/09/20 Python 與 人工智慧初探
Reivew:Molecular Biology of the cell
陳柏源(Chen, Po-Yuan) 2023/09/27 Python與machine learning的應用: 以 SVM (support vector machine) 為例
Information retrieval from biology databases
陳柏源(Chen, Po-Yuan) 2023/10/04 Python與deep learning的應用: 以 LSTM (Long short time memory) 為例
Information retrieval from biology databases
陳柏源(Chen, Po-Yuan) 2023/10/11 人工智慧在聞診上的應用
Hidden Markov Model and Gene finding
陳柏源(Chen, Po-Yuan) 2023/10/18 人工智慧在切診上的應用
Hidden Markov Model and Gene finding
陳柏源(Chen, Po-Yuan) 2023/10/25 量子電腦簡介
Bioinformatics application tools: bioedit and rasmol
陳柏源(Chen, Po-Yuan) 2023/11/01 何謂生物資訊?(線上非同步)
Bioinformatics application tools: bioedit and rasmol
陳柏源(Chen, Po-Yuan) 2023/11/08 期中考
Mid-term exam
陳柏源(Chen, Po-Yuan) 2023/11/15 分子生物學回顧(線上非同步)
Protein and protein interaction
陳柏源(Chen, Po-Yuan) 2023/11/22 生物資料庫淺介(線上非同步)
Protein and protein interaction
陳柏源(Chen, Po-Yuan) 2023/11/29 Hidden Markov 模型與基因功能的發掘淺析 (線上非同步)
Molecular evolution analysis
陳柏源(Chen, Po-Yuan) 2023/12/06 生物資訊應用工具: bioedit 與 rasmo (線上非同步)
Molecular evolution analysis
陳柏源(Chen, Po-Yuan) 2023/12/13 蛋白質與蛋白質的交互作用 (線上非同步)
Phylogeny programs
陳柏源(Chen, Po-Yuan) 2023/12/20 分子演化分析 (線上非同步)
Phylogeny programs
陳柏源(Chen, Po-Yuan) 2023/12/27 分子演化分析工具與程式 (線上非同步)
DNA microarray analysis
陳柏源(Chen, Po-Yuan) 2024/01/03 DNA 生物晶片分析 (線上非同步)
Developer's tools: PHP, MySQL and Apache
陳柏源(Chen, Po-Yuan) 2024/01/10 期末考試
Final exam
陳柏源(Chen, Po-Yuan)